Hello
Unfortunately, Andy do not give clear info about this warning, but yes, it is possible. I already get such problem when the slice plane is exactly at the same level than a totally flat surface of the mesh (even if it only one triangle). Slightly changing the depth increment can sometimes solve the problem. (needs to experiment with different values, sometime changing the DI about only 0.01 is sufficient)
Also I have had problems if the target depth given in the mop is below the bottom of the 3D mesh. ... And of course this can happens on "bad" mesh.
++
David